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Written by Matthias GALLÉ
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maximal coverage
| sequence | size (bytes) | update | from scratch Karkkainen & Sanders | from scratch Larsson & Sadakane | ratio Karkkainen & Sanders | ratio Larsson & Sadakane
| | All_Up_1M.fasta | 1001002 | 2350 | 14109 | 4167 | 6.00 | 1.77 |
| All_Up_400k.fasta | 399615 | 884 | 2758 | 1129 | 3.12 | 1.28 |
| Helden_All.fasta | 112507 | 165 | 382 | 191 | 2.32 | 1.16 |
| Helden_CGN.fasta | 32871 | 19 | 55 | 50 | 2.89 | 2.63 |
| Spor_All_2x.fasta | 444906 | 61 | 35 | 71 | 0.57 | 1.16 |
| Spor_All.fasta | 222453 | 413 | 775 | 401 | 1.88 | 0.97 |
| Spor_EarlyI.fasta | 31039 | 25 | 56 | 47 | 2.24 | 1.88 |
| Spor_EarlyII.fasta | 25008 | 33 | 60 | 39 | 1.82 | 1.18 |
| Spor_Middle.fasta | 54325 | 73 | 117 | 66 | 1.60 | 0.90 |
maximal length
| sequence | size (bytes) | update | from scratch Karkkainen & Sanders | from scratch Larsson & Sadakane | ratio Karkkainen & Sanders | ratio Larsson & Sadakane
| | All_Up_1M.fasta | 1001002 | 1200 | 55389 | 23982 | 46.16 | 19.98 |
| All_Up_400k.fasta | 399615 | 481 | 13294 | 6698 | 27.64 | 13.93 |
| Helden_All.fasta | 112507 | 122 | 1363 | 933 | 11.17 | 7.65 |
| Helden_CGN.fasta | 32871 | 34 | 232 | 178 | 6.82 | 5.24 |
| Spor_All_2x.fasta | 444906 | 57 | 34 | 44 | 0.60 | 0.77 |
| Spor_All.fasta | 222453 | 250 | 3314 | 2140 | 13.26 | 8.56 |
| Spor_EarlyI.fasta | 31039 | 26 | 220 | 190 | 8.46 | 7.31 |
| Spor_EarlyII.fasta | 25008 | 15 | 166 | 121 | 11.07 | 8.07 |
| Spor_Middle.fasta | 54325 | 62 | 506 | 396 | 8.16 | 6.39 |
random
| sequence | size (bytes) | update | from scratch Karkkainen & Sanders | from scratch Larsson & Sadakane | ratio Karkkainen & Sanders | ratio Larsson & Sadakane
| | All_Up_1M.fasta | 1001002 | 1238 | 61657 | 24597 | 49.80 | 19.87 |
| All_Up_400k.fasta | 399615 | 501 | 13959 | 6777 | 27.86 | 13.53 |
| Helden_All.fasta | 112507 | 119 | 1511 | 963 | 12.70 | 8.09 |
| Helden_CGN.fasta | 32871 | 31 | 244 | 172 | 7.87 | 5.55 |
| Spor_All_2x.fasta | 444906 | 112 | 82 | 94 | 0.73 | 0.84 |
| Spor_All.fasta | 222453 | 246 | 3658 | 2107 | 14.87 | 8.57 |
| Spor_EarlyI.fasta | 31039 | 34 | 187 | 152 | 5.50 | 4.47 |
| Spor_EarlyII.fasta | 25008 | 20 | 145 | 151 | 7.25 | 7.55 |
| Spor_Middle.fasta | 54325 | 51 | 526 | 351 | 10.31 | 6.88 |
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